So you're saying that the audio/radio antenna was used for the PATS? The key fob antenna (remote locking, trunk solenoid, panic alarm) is located in the passenger side A pillar and the receiver box is under the dash behind the glovebox. The PCM is close so I don't see why Ford wouldn't keep all the components in close proximity to minimize wire runs. Was his car a E0?
The PATS ring I pulled from an early 98 E0 has all the wiring running in to the main harness which is attached to the steering column (ignition, airbag, turn signals, wiper controls, etc.). It appears to run towards the PCM but there's a lot of wires in that bundle and I didn't pull the whole harness and untape it to verify. A wiring diagram would be the only other way to figure it out.