Having owned both, both have their pro's and con's.
My bone stock 99 SVT is so much more reliable than my 96 SE which had just about everything modified on it from the engine, brakes, transmission, brakes, electrical, etc. I know when I go out in the morning to start it up, its going to fire right up. There's no quirks about the car at all. I get the occasional P0420 code but thats about it. The suspension isn't as tight as what it used to be and in my mind its pretty slow, but I still enjoy driving it.
On the other hand, my turbo 96 was a blast to drive when it was running right. I loved crusing in that car, even if you did smell like oil after you got done driving it since it burned through a quart of oil every 500 miles. Of course, the BAER brakes shuttured because they wore unevenly, the idle was awful from the turbo kit, the battery would be dead by morning if you didnt disconnect the battery, the car would overheat if you didnt let the car warm up for like 15 minutes because the BAT electric waterpump was so fickle. I'm sad to see the car go, but it's nice to have a car thats problem free.