If it's an ATX then thats how you do it, but make sure you leave enough wire for the over drive from the shifter itself. If not it's not fun trying to get the wires back together.
What color are you painting it.
Have you considered something like this?

My Car...

Mulan007's Dash...
(This is nice)...


www.ChicagoCEG.com 2006 White Grand Prix