Just bolt her up, its designed to work on your engine. The hardest part of the vortech from what I understand is getting the pulley end of the jackshaft PERFECTLY aligned to the blower end, in fact the only real GOOD way is to pull the engine and trans to do it. If its not alighned properly seal issues start arising. However I'm anal and most people have been running 5-6K miles on revised shafts/seals and haven't had a problem so take it for what that's worth.
2000 Roush Cougar MTX
MSDS Headers, Rear disc conversion, SVT TB and IM, Custom 2.5" exhaust, Weapon R Dragon w/kkm MAF adaptor, B&M, NR wht gauges
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