After you reset the comp. dont touch the accelerator. Just let it idle until the cooling fan kicks on. This will help out with letting the comp. relearn its settings and to adjust the idle with air.
'95 Contour GL, zetec mtx, drop in K&N, exhaust res removed, 4 10" Kenwoods powered by 1000W Visonik amp, 4 5"x7"/6"x8" Visoniks