I didn't want to take a chance that the clutch would come without the alignment tool. Ford sells the pressure plate and clutch as separate parts (i.e. it's not advertised as a "here's everything you need" type kit).
My new SPEC kit is already on its way to me -- I'm sure I'll be happy with it, as others have been. If someone can confirm that the SVT clutch part (or the pressure plate) includes the alignment tool, then I'll gladly add that information to the MTX-75 Parts Spreadsheet (which, by the way, has been extensively updated throughout this past week).