I take it you have a cone air filter on your air intake now? Most whistling noises show up after the stock filter box assy is pulled an an open air element filter is put on. The whistling is the air past the throttlebody plate at certain cruise conditions. If this is your whistling then you can do nothing about it other than baffle the intake again or start making changes to the throttlebody.
Former owner of '99 CSVT - Silver #222/2760
356/334 wHP/TQ at 10psi on pump gas!
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'05 Volvo S40 Turbo 5 AWD with 6spd, Passion Red
'06 Mazda5 Touring, 5spd,MTX, Black